BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C10SP1|AL429880
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1276 1017 0.0
>3x_Contig1276
Length = 6662
Score = 1017 bits (512), Expect = 0.0
Identities = 514/516 (99%)
Strand = Plus / Minus
Query: 307 ttttcttgaaaagcttaccaccyccaaacttgaaatgacttgtagtaccatcaccagcag 366
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6662 ttttcttgaaaagcttaccacctccaaacttgaaatgacttgtagtaccatcaccagcag 6603
Query: 367 atgaaggaggatttgagtcatcgttagaatttgattggaatgccagagtgctgccggttc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6602 atgaaggaggatttgagtcatcgttagaatttgattggaatgccagagtgctgccggttc 6543
Query: 427 cattatttgatagcccgcyatcattatcgttactttttgtggaatcgttattagcactat 486
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6542 cattatttgatagcccgctatcattatcgttactttttgtggaatcgttattagcactat 6483
Query: 487 cagtattatccgagttaatgactttggcagcacacctaaaatgataatttactctagcag 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6482 cagtattatccgagttaatgactttggcagcacacctaaaatgataatttactctagcag 6423
Query: 547 atggtagacagatggtctcaggaatattattagcaaatacaacggggacaataaaaatat 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6422 atggtagacagatggtctcaggaatattattagcaaatacaacggggacaataaaaatat 6363
Query: 607 aatcacccggctgaaacgtgcacgagttggtatcagaagcttcgtttatatctttgagga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6362 aatcacccggctgaaacgtgcacgagttggtatcagaagcttcgtttatatctttgagga 6303
Query: 667 aattatctttggtcttttgcttcttgagataaggtctgtcgccaaaatcctgaatgtttt 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6302 aattatctttggtcttttgcttcttgagataaggtctgtcgccaaaatcctgaatgtttt 6243
Query: 727 taaaattctttcttctgcataaattttgtgtattttcaattattaccaactcttgatcag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6242 taaaattctttcttctgcataaattttgtgtattttcaattattaccaactcttgatcag 6183
Query: 787 ctgcagaaaacccaacatataggttgtaattatcgg 822
||||||||||||||||||||||||||||||||||||
Sbjct: 6182 ctgcagaaaacccaacatataggttgtaattatcgg 6147
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7002
Number of Sequences: 1807
Number of extensions: 7002
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)